Table 1 Basic information on the intestinal and liver transcriptomes of the two dietary groups of fish
Fish group | Total clean reads | Clean reads bases (bp) | SNP Number | Unique mapped reads | Total mapped reads(%) |
|---|---|---|---|---|---|
C-Intestine1 | 40,875,328 | 6,120,857,148 | 178,115 | 33,355,355 (81.60%) | 37,659,356 (92.13%) |
C-Intestine2 | 44,897,254 | 6,724,235,532 | 172,520 | 36,725,040 (81.80%) | 41,284,036 (91.95%) |
C-Intestine3 | 45,432,496 | 6,801,174,866 | 176,720 | 36,842,441 (81.09%) | 41,430,875 (91.19%) |
H-Intestine1 | 45,623,958 | 6,831,303,448 | 469,045 | 38,470,050 (82.10%) | 40,048,325 (87.78%) |
H-Intestine2 | 45,240,496 | 6,777,495,390 | 388,932 | 35,867,617 (82.10%) | 40,857,373 (90.31%) |
H-Intestine3 | 45,129,468 | 6,760,490,246 | 296,917 | 32,785,787 (82.43%) | 40,738,675 (90.27%) |
H-Liver1 | 40,301,740 | 6,031,302,492 | 124,038 | 35,510,632 (77.83%) | 37,363,894 (92.71%) |
H-Liver2 | 50,305,328 | 7,536,275,016 | 134,514 | 36,584,989 (80.87%) | 46,520,571 (92.48%) |
H-Liver3 | 42,994,402 | 6,436,248,490 | 113,674 | 36,549,783 (80.99%) | 39,787,469 (92.54%) |
C-Liver1 | 46,856,834 | 7,010,976,494 | 92,877 | 33,170,072 (82.30%) | 43,343,128 (92.50%) |
C-Liver2 | 43,690,178 | 6,540,010,734 | 92,342 | 41,286,506 (82.07%) | 35,867,617 (82.10%) |
C-Liver3 | 39,773,512 | 5,952,176,384 | 87,825 | 35,407,930 (82.35%) | 36,940,518 (92.88%) |