Table 5 Differentially expressed uni-transcripts (IBDV-infected versus Control) produced by Cufflink, for all six inbred lines. Uniquely up- or downregulated uni-transcripts in the samples were uni-transcripts screened to be only present in only one sample
| Â | Line 15 | Line 6 | Line 7 | Line N | Line O | Line P |
|---|---|---|---|---|---|---|
Upregulated in infected samples | 359 | 136 | 177 | 102 | 74 | 222 |
Downregulated in infected samples | 206 | 96 | 94 | 47 | 56 | 123 |
Uniquely in infected samples | 3 | 0 | 1 | 0 | 0 | 0 |
Uniquely in control samples | 1 | 0 | 0 | 0 | 0 | 0 |
Total | 569 | 232 | 272 | 149 | 130 | 345 |