Candidate gene screening for lipid deposition using combined transcriptomic and proteomic data from Nanyang black pigs

Table 2 Log2FoldChanges from the RNA-seq and qRT-PCR analysis of 14 DEGs

	log2FoldChange in RNA-seq	q value	log2FoldChange in qRT-PCR of LD	P value	log2FoldChange in qRT-PCR of backfat tissue	P value
ACACA	2.390	7.6381E-06	1.989	0.021	−0.903	0.044
GK	1.498	0.00504505	1.468	0.040	1.566	0.027
SQLE	1.695	0.00123394	2.271	0.038	1.670	0.040
FASN	3.513	0.00887994	1.678	0.039	2.620	0.049
SCD	6.395	0.00011995	3.529	0.024	1.478	0.038
DHCR24	2.623	5.1834E-06	1.732	0.034	2.011	0.002
ACSL4	−1.360	0.00237211	− 1.623	0.030	− 1.774	0.004
CAT	−1.264	0.00027508	−1.224	0.018	−1.410	0.003
PPARA	2.278	9.7765E-07	0.593	0.034	1.033	0.041
UCP3	−1.756	0.00023243	−1.564	0.040	−2.374	0.010
PDK4	−4.015	0.00096681	−2.125	0.019	−1.580	0.045
CEBPA	1.821	0.004614	2.822	0.042	1.578	0.023
SLC25A20	−1.458	0.00114154	−0.838	0.025	−1.193	0.048
EGFR	1.172	0.00289223	0.677	0.041	1.165	0.020

ISSN: 1471-2164