Table 2 GO Enrichments for each cluster. Top five significant enrichments (FDR > 0.05) for each cluster are shown. Note that clusters 5, 10, 11, and 12 had fewer than five significant enrichments. Full list of enriched GO terms can be found in Additional file 2

1

GO:0008610

BP

lipid biosynthetic process

1.68E-09

1

GO:0044255

BP

cellular lipid metabolic process

1.14E-08

1

GO:0008299

BP

isoprenoid biosynthetic process

1.85E-07

1

GO:0019288

BP

isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway

1.91E-07

1

GO:0046577

MF

long-chain-alcohol oxidase activity

2.69E-07

2

GO:0030599

MF

pectin esterase activity

9.04E-66

2

GO:0045490

BP

pectin catabolic process

1.56E-60

2

GO:0045330

MF

aspartyl esterase activity

1.92E-56

2

GO:0010393

BP

galacturonan metabolic process

1.30E-50

2

GO:0045488

BP

pectin metabolic process

1.30E-50

3

GO:0044435

CC

plastid part

7.58E-70

3

GO:0044434

CC

chloroplast part

7.58E-70

3

GO:0009579

CC

thylakoid

2.78E-62

3

GO:0044436

CC

thylakoid part

5.12E-53

3

GO:0009507

CC

chloroplast

1.85E-51

4

GO:0016054

BP

organic acid catabolic process

3.47E-09

4

GO:0046395

BP

carboxylic acid catabolic process

3.47E-09

4

GO:0009702

MF

L-arabinokinase activity

1.46E-08

4

GO:0044282

BP

small molecule catabolic process

1.64E-07

4

GO:1901606

BP

alpha-amino acid catabolic process

9.71E-07

5

no significant terms

6

GO:0010333

MF

terpene synthase activity

4.03E-10

6

GO:0016838

MF

carbon-oxygen lyase activity, acting on phosphates

1.00E-09

6

GO:0010279

MF

indole-3-acetic acid amido synthetase activity

5.93E-08

6

GO:0010334

MF

sesquiterpene synthase activity

2.57E-06

6

GO:0008152

BP

metabolic process

1.17E-05

7

GO:0005576

CC

extracellular region

3.96E-05

7

GO:0000272

BP

polysaccharide catabolic process

8.36E-05

7

GO:0045490

BP

pectin catabolic process

1.13E-04

7

GO:0010393

BP

galacturonan metabolic process

1.45E-03

7

GO:0045488

BP

pectin metabolic process

1.45E-03

8

GO:0080054

MF

low-affinity nitrate transmembrane transporter activity

2.18E-04

8

GO:0080055

BP

low-affinity nitrate transport

2.18E-04

8

GO:0015706

BP

nitrate transport

7.68E-02

8

GO:0015112

MF

nitrate transmembrane transporter activity

7.68E-02

8

GO:0015833

BP

peptide transport

7.68E-02

9

GO:0000272

BP

polysaccharide catabolic process

0

9

GO:0004553

MF

hydrolase activity, hydrolyzing O-glycosyl compounds

0

9

GO:0004568

MF

chitinase activity

0

9

GO:0005976

BP

polysaccharide metabolic process

0

9

GO:0006022

BP

aminoglycan metabolic process

0

10

GO:0010333

MF

terpene synthase activity

1.83E-02

10

GO:0016838

MF

carbon-oxygen lyase activity, acting on phosphates

1.83E-02

11

no significant terms

12

GO:0006869

BP

lipid transport

2.77E-02