Table 4 List of differentially expressed genes in spot vs. cu1 tissues belonging to different signalling pathways. Their log2FC, padj values, and the signalling pathway they are associated with
From: The genetic basis of wing spots in Pieris canidia butterflies
| Â | Gene ID | Gene Name (Predicted) | Log2FC | padj |
|---|---|---|---|---|
Toll signalling | Pcan_04093 | protein spaetzle isoform X2 | 1.4652 | 3.63E-05 |
Pcan_02090 | CLIP domain-containing serine protease 2-like | 1.2815 | 3.98E-08 | |
Pcan_14273 | modular serine protease-like | 1.1835 | 3.22E-07 | |
Pcan_12583 | serine protease inhibitor 88Ea-like | 1.0644 | 2.36E-09 | |
Pcan_02088 | venom protease-like isoform X2 | 1.0466 | 1.58E-05 | |
Pcan_14259 | modular serine protease-like | 0.9910 | 1.15E-05 | |
Pcan_05126 | plasma protease C1 inhibitor-like | 0.6930 | 6.59E-05 | |
Pcan_10534 | protein toll-like | 0.6848 | 0.0004 | |
Pcan_01305 | SUMO-activating enzyme subunit 1 | 0.6812 | 0.0008 | |
Pcan_08213 | phenoloxidase-activating enzyme-like | 0.6700 | 0.0008 | |
Pcan_00871 | N-glycosylase/DNA lyase | 0.5928 | 0.0005 | |
Pcan_01571 | toll-like receptor Tollo | 0.4321 | 0.0046 | |
Pcan_08988 | beta-arrestin-1 isoform X3 | -0.6716 | 7.06E-06 | |
Pcan_01487 | optineurin isoform X1 | -0.8099 | 0.0079 | |
Wnt signalling | Pcan_05079 | transmembrane emp24 domain-containing protein 2 | 0.8099 | 0.0029 |
Pcan_10877 | transmembrane emp24 domain-containing protein 3 | 0.7498 | 0.0027 | |
Pcan_09890 | ruvB-like 2 | 0.7422 | 0.0019 | |
Pcan_00025 | ruvB-like helicase 1 | 0.7020 | 2.94E-06 | |
Pcan_10686 | tuberin isoform X2 | 0.4477 | 0.0014 | |
Pcan_12849 | bifunctional heparan sulfate N-deacetylase/N-sulfotransferase | -1.6603 | 7.55E-06 | |
Pcan_06691 | vacuolar protein sorting-associated protein 26B-like | -1.2962 | 2.47E-10 | |
Pcan_13572 | F-box/WD repeat-containing protein 11 isoform X1 | -1.1326 | 0.0013 | |
Pcan_05017 | flotillin-2 isoform X1 | -0.8151 | 0.0091 | |
Pcan_04915 | serine/threonine-protein phosphatase alpha-2 isoform | -0.7119 | 0.0068 | |
Pcan_13532 | transmembrane emp24 domain-containing protein 5-like | -0.7038 | 0.0068 | |
Pcan_04914 | serine/threonine-protein phosphatase alpha-2 isoform | -0.6798 | 0.0050 | |
Pcan_12157 | protein smoothened isoform X1 | -0.6092 | 0.0088 | |
Pcan_05769 | zinc finger protein 271 isoform X2 | -0.4434 | 0.0037 | |
Pcan_08442 | glycogen synthase kinase-3 beta isoform X1 | -0.4415 | 0.0063 | |
Notch signalling | Pcan_13084 | inorganic pyrophosphatase | 1.0857 | 1.18E-05 |
Pcan_05048 | neurogenic locus notch homolog protein 1 | 1.0814 | 0.0010 | |
Pcan_08278 | eukaryotic translation initiation factor 3 subunit F | 0.9345 | 8.72E-06 | |
Pcan_12581 | nicastrin | 0.7412 | 2.47E-05 | |
Pcan_14339 | V-type proton ATPase catalytic subunit A | 0.7386 | 1.44E-06 | |
Pcan_07331 | charged multivesicular body protein 2a | 0.6367 | 0.0030 | |
Pcan_12310 | protein numb isoform X2 | -1.4288 | 4.45E-07 | |
Pcan_08419 | REST corepressor 3 isoform X1 | -1.0573 | 0.0010 | |
Pcan_00525 | importin subunit alpha-4 | -0.7257 | 3.92E-05 | |
Pcan_10221 | neurogenic protein mastermind-like | -0.6455 | 0.0002 | |
Pcan_08957 | N6-adenosine-methyltransferase subunit METTL3 | -0.5183 | 0.0018 | |
TGF-β signaling | Pcan_12435 | Krueppel-like factor 10 | 0.9471 | 2.58E-05 |
Pcan_01128 | peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase | 0.5512 | 0.0025 | |
Pcan_06672 | calpain-A isoform X3 | 0.5082 | 0.0001 | |
Pcan_06120 | mothers against decapentaplegic homolog 6 | -1.9599 | 0.0001 | |
Pcan_02675 | activin receptor type-1 isoform X2 | -1.1423 | 0.0026 | |
Pcan_05732 | E3 ubiquitin-protein ligase SMURF2 | -1.0781 | 0.0027 | |
Pcan_11478 | CTD nuclear envelope phosphatase 1 homolog | -1.0736 | 0.0020 | |
Pcan_06119 | mothers against decapentaplegic homolog 6 | -1.0676 | 0.0001 | |
Pcan_04567 | protein expanded | -0.8013 | 0.0028 | |
Pcan_03104 | cdc42 homolog | -0.7415 | 0.0008 | |
Pcan_07516 | protein 60Â A | -0.6553 | 0.0089 | |
Pcan_01823 | Zinc finger protein 40 | -0.5354 | 0.0024 | |
Hedgehog Signalling | Pcan_13241 | tiggy-winkle hedgehog protein | -0.9714 | 7.82E-07 |
Juvenile Hormone Signalling | Pcan_04554 | juvenile hormone acid O-methyltransferase-like | 1.4772 | 0.0001 |
Ecdysone signalling | Pcan_00270 | cytochrome P450 6k1-like | 1.3776 | 2.39E-13 |
Pcan_11395 | cytochrome P450 306a1 | 0.7765 | 0.0079 | |
Pcan_03710 | ecdysone-induced protein 74EF isoform X1 | -1.3910 | 0.0010 | |
Pcan_05558 | transmembrane GTPase Marf | -1.1996 | 0.0024 | |
Pcan_14165 | ecdysone receptor isoform X1 | -0.3772 | 0.0039 | |
FGF Signalling | Pcan_04256 | acidic fibroblast growth factor intracellular-binding protein | 0.8700 | 1.50E-06 |