Table 1 Whole grapevine genome sequences published until today:
From: Chimeras in Merlot grapevine revealed by phased assembly
Authors | Year | Technology | Grapevine genotype | Size (mbp) | Haplotigs size (mbp) | Coverage | N50 (kbp) | BUSCO |
|---|---|---|---|---|---|---|---|---|
[25] Jaillon et al. | 2007 | Sanger | PN 40,024 (12x.v1) | 487 | Â | 8X | 65.9 | Â |
[26] Canaguier et al. | 2017 | Sanger | PN 40,024 (12x.v2) | Â | Â | 12X | Â | Â |
[28] Chin et al. | 2017 | PacBio RS II | Cabernet-Sauvignon | 591 | Â | 140X | 72 | 80% |
[29] Roach et al. | 2018 | PacBio RS II | Chardonnay | 490 | Â | 115X | 935.8 | 95% |
[30] Minio et al. | 2019 | PacBio RS II | Carmenère | 622 |  | 115X | 1 040 | 95% |
[31] Girollet et al. | 2019 | PacBio RS II | Vitis riparia | 500 | Â | 225X | 1 000 | 95% |
[32] Massonnet et al. | 2020 | PacBio RS II PacBio Sequel II | Muscadinia rotundifolia | 460 | 364 | 115X | 4 761 | 97% |
Vitis arizonica b40-14 | 604 | 337 | 160X | 1 536 | 96% | |||
Vitis vinifera subsp. sylvestris O34-16 | 678 | 252 | 85X | 998 | 97% | |||
Vitis vinifera subsp. sylvestris DVIT3603.16 | 667 | 314 | 82X | 2 661 | 97% | |||
Vitis vinifera subsp. sylvestris DVIT3603.07 | 663 | 234 | 61X | 1 169 | 97% | |||
Vitis vinifera subsp. sylvestris DVIT3351.27 | 670 | 311 | 77X | 1 778 | 97% | |||
Zinfandel | 591 | 306 | 94X | 1 062 | 97% | |||
Merlot | 606 | 244 | 64X | 810 | 94% | |||
Black Corinth 2.1 | 672 | 288 | 63X | 1 113 | 97% | |||
Black Corinth seeded | 650 | 357 | 75X | 2 309 | 97% | |||
Cabernet-Sauvignon | 449 | 444 | 147X | 24 161 | 97% | |||
[33] Zou et al. | 2021 | PacBio Sequel I | Carmenère | 623 | 420 | 112x | 1 039 | 97% |
PacBio Sequel I | Riesling | 742 | 323 | 118x | 2 970 | 98% |