Chimeras in Merlot grapevine revealed by phased assembly

BMC Genomics

Table 3 Assembly quality after trio-binning

Sample name	N50 (Mb)	L50	N90 (Mb)	L90	Number of contigs	Total length (Mb)
Merlot-root-Hap-CF	18.67	10	7.50	26	509	530
Merlot-root-Hap-MG	14.95	12	7.67	30	1 849	586
Merlot-leaf-Hap-CF	21.66	10	8.24	23	206	519
Merlot-leaf-Hap-MG	15.83	12	6.18	31	1 254	550
Average for all samples	17.77	11	7.39	27	955	546

Assembly quality results are defined by N50, L50, N90, L90 statistics. They are completed with the number of contigs assembled and the total length of the assembly. Merlot-root-Hap-CF refers to the root haplotype of Merlot genome transmitted by Cabernet Franc, Merlot-root-Hap-MG, the one transmitted by Magdeleine noire des Charentes, and so on

ISSN: 1471-2164