Table 1 Reference sequences of GenBank used for the design of RNA probes used for targeted enrichment
Accession No. | Length (bp) | Species | Common Name | Family | Order | Class | Fishbase ID |
|---|---|---|---|---|---|---|---|
KU244258 | 16 909 | Acanthurus nigrofuscus | Brown surgeonfish | Acanturidae | Perciformes | Actinopterygii | 4739 |
NC_011323 | 16 451 | Aluterus scriptus | Scribbled leatherjacket filefish | Monacantidae | Tetraodontiformes | Actinopterygii | 4275 |
NC_026307 | 17 243 | Anoxypristis cuspidate | Pointed sawfish | Pristidae | Rhinopristiformes | Actinopterygii | 8211 |
JQ728563 | 16 496 | Argyrosomus japonicus | Japanese meagre | Scianidae | Perciformes | Actinopterygii | 11979 |
NC_025942 | 16 750 | Atlantoraja castelnaui | Spotback skate | Arhynchobatidae | Rajiformes | Chondrichthyes | 14143 |
NC_003188 | 16 529 | Beryx splendens | Splendid alfonsino | Berycidae | Beryciformes | Actinopterygii | 1320 |
NC_024284 | 16 706 | Carcharhinus melanopterus | Blacktip reef shark | Carcharhinidae | Carcharhiniformes | Chondrichthyes | 877 |
NC_002761 | 18 705 | Conger myriaster | Whitespotted conger | Congridae | Anguilliformes | Actinopterygii | 302 |
NC_022509 | 17 017 | Epinephelus merra | Honeycomb grouper | Epinephelidae | Perciformes | Actinopterygii | 4923 |
NC_022691 | 16 701 | Isurus oxyrinchus | Shortfin mako | Lamniformes | Lamnidae | Chondrichthyes | 752 |
NC_005316 | 16 515 | Katsuwonus pelamis | Skipjack tuna | Scombridae | Perciformes | Actinopterygii | 107 |
NC_004380 | 16 479 | Lophius americanus | American angler | Lophiidae | Lophiiformes | Actinopterygii | 532 |
NC_016661 | 16 543 | Lutjanus argentimaculatus | Mangrove red snapper | Lutjanidae | Perciformes | Actinopterygii | 1407 |
FR751402 | 17 078 | Merluccius merluccius | European hake | Merluccidae | Gadiformes | Actinopterygii | 30 |
NC_003182 | 16 685 | Mugil cephalus | Flathead grey mullet | Mugilidae | Mugiliformes | Actinopterygii | 785 |
NC_002386 | 17 090 | Paralichthys olivaceus | Bastard halibut | Paralichthyidae | Pleuronectiformes | Actinopterygii | 1351 |
NC_002648 | 16 481 | Polymixia japonica | Silver eye | Polymixiidae | Polymixiiformes | Actinopterygii | 12996 |
KJ140136 | 16 780 | Rhinobatos schlegelii | Brown guitarfish | Rhinobatidae | Rhinopristiformes | Actinopterygii | 7969 |
NC_009587 | 16 651 | Sardinella maderensis | Madeirian sardinella | Clupeidae | Clupeiformes | Actinopterygii | 1047 |
NC_016867 | 16 500 | Sciaenops ocellatus | Red drum | Scianidae | Perciformes | Actinopterygii | 1191 |
NC_034748 | 16 734 | Squalus brevirostris | Japanese shortnose spurdog | Squalidae | Squaliformes | Chondrichthyes | 63317 |
NC_025328 | 16 690 | Squatina Formosa | Taiwan angleshark | Squatinidae | Squatiniformes | Chondrichthyes | 732 |
NC_026998 | 16 534 | Strongylura anastomella | Pacific needlefish | Belonidae | Beloniformes | Actinopterygii | 23039 |
NC_024026 | 16 558 | Trachinotus blochii | Snubnose pompano | Carangidae | Perciformes | Actinopterygii | 1963 |
NC_003173 | 16 065 | Zenopsis nebulosus | Mirror dory | Zeidae | Zeiformes | Actinopterygii | 3255 |