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Fig. 5 | BMC Genomics

Fig. 5

From: Recovering high-quality bacterial genomes from cross-contaminated cultures: a case study of marine Vibrio campbellii

Fig. 5

BRIG visualization of comparative sequence analysis of the plasmid. BLASTn was used to align plasmid sequences from newly assembled genomes BF5_0283 and Mt009_b1 with all V. campbellii plasmids in PLSDB. Circles from outside to inside are plasmid sequences of BF5_0283, Mt009_b1, LMB29, 20130629003S01, BoB-90, 170,502, LA16-V1, DS40M4, ATCC-1, ATCC-2, CAIM 519. In cases where the genome contained more plasmids, all plasmids were aligned. The intensity in colors indicates 100% (higher intensity), 70% (medium intensity) and 50% (low intensity) identity. The outermost circle shows protein coding genes with hits in V. campbellii plasmids from PLSDB (gray), and selected unique genes of newly assembled plasmids (red). Complete annotation of common genes is available in Additional file 1: Table S12

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