Unified mRNA Subcellular Localization Predictor based on machine learning techniques

BMC Genomics

Table 3 Results from Ablation Study using CatBoost model for CV

Feature	CatBoost	Precision	Recall	Acc	Specificity	F1 Score
k-mer	Cytoplasm	0.74	0.88	0.82	0.77	0.80
	ER	0.94	0.38	0.94	1.00	0.54
	ExR	0.84	0.20	0.95	1.00	0.32
	Mitochondria	0.96	0.85	0.99	1.00	0.90
	Nucleus	0.81	0.87	0.87	0.87	0.84
	avg	0.86	0.63	0.91	0.93	0.68
Pse-KNC	Cytoplasm	0.64	0.77	0.72	0.68	0.70
	ER	0.72	0.13	0.91	0.99	0.22
	ExR	0.53	0.07	0.94	1.00	0.13
	Mitochondria	0.83	0.63	0.99	1.00	0.71
	Nucleus	0.67	0.75	0.76	0.76	0.71
	avg	0.68	0.47	0.86	0.89	0.49
Z-curve 144	Cytoplasm	0.68	0.83	0.76	0.70	0.74
	ER	0.87	0.21	0.92	1.00	0.34
	ExR	0.77	0.05	0.94	1.00	0.09
	Mitochondria	0.96	0.92	1.00	1.00	0.94
	Nucleus	0.75	0.81	0.82	0.83	0.78
	avg	0.81	0.57	0.89	0.91	0.58
Z-curve 44	Cytoplasm	0.72	0.84	0.79	0.75	0.78
	ER	0.81	0.33	0.93	0.99	0.47
	ExR	0.80	0.11	0.95	1.00	0.19
	Mitochondria	0.94	0.87	0.99	1.00	0.90
	Nucleus	0.77	0.84	0.84	0.84	0.81
	avg	0.81	0.60	0.90	0.92	0.63

ISSN: 1471-2164