Table 3 Statistical analysis of SVs in SiHa and HeLa cell lines
Sample | type | exonic | splicing | ncRNA | UTR5 | UTR3 | intronic | Up-stream | Down-stream | intergenic |
|---|---|---|---|---|---|---|---|---|---|---|
SiHa | DUP | 51 | 1 | 5 | 0 | 0 | 13 | 0 | 1 | 87 |
INV | 87 | 0 | 21 | 0 | 1 | 20 | 1 | 1 | 117 | |
TRA | 7 | 1 | 74 | 2 | 7 | 357 | 7 | 13 | 1460 | |
DEL | 145 | 6 | 655 | 10 | 53 | 3281 | 75 | 86 | 8186 | |
INS | 361 | 4 | 2273 | 87 | 281 | 11,823 | 333 | 256 | 19,282 | |
HeLa | DUP | 19 | 0 | 2 | 0 | 0 | 11 | 1 | 1 | 59 |
INV | 78 | 1 | 12 | 0 | 0 | 14 | 0 | 1 | 112 | |
TRA | 9 | 2 | 71 | 2 | 6 | 322 | 6 | 10 | 1481 | |
DEL | 135 | 8 | 814 | 14 | 64 | 4071 | 95 | 116 | 9869 | |
INS | 349 | 11 | 2735 | 83 | 290 | 13,232 | 327 | 265 | 22,220 |