Fig. 5

Predicted pattern of gene family gain and loss in representative fungal genomes. Cladogram representation of Maximum Likelihood phylogeny of A. anomala and 15 related fungi based on 2,800 single copy orthologues. The total number of protein families in each species or node is estimated by Wagner parsimony and stochastic mapping. The numbers of the branches correspond to gene family gain (green) or loss (red) and inferred ancestral protein families (in oval). The numbers of gene families, unassigned genes, and total gene numbers are indicated for each species