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Table 1 Summary of sequencing data

From: Screening of temperature-responsive signalling molecules during sex differentiation in Asian yellow pond turtle (Mauremys mutica)

Sample

Total Raw Reads

Total Clean Reads

Clean Reads ≥ Q30 (%)

Total Mapping (%)

Uniquely Mapping (%)

Multiple Mapping (%)

M6-1

43,481,782

21,740,891

95.10%

38,819,094 (89.28%)

37,398,472 (86.01%)

1,420,622 (3.27%)

M6-2

44,968,352

22,484,176

95.27%

40,167,792 (89.32%)

38,662,056 (85.98%)

1,505,736 (3.35%)

M12-1

43,042,014

21,521,007

95.10%

38,253,100 (88.87%)

36,860,600 (85.64%)

1,392,500 (3.24%)

M12-2

42,424,084

21,212,042

95.27%

37,886,778 (89.30%)

36,454,303 (85.93%)

1,432,475 (3.38%)

M24-1

43,114,324

21,557,162

94.98%

38,020,470 (88.19%)

36,453,422 (84.55%)

1,567,048 (3.63%)

M24-2

43,816,554

21,908,277

95.04%

39,262,607 (89.61%)

37,740,284 (86.13%)

1,522,323 (3.47%)

M48-1

43,478,496

21,739,248

95.48%

38,974,386 (89.64%)

37,495,319 (86.24%)

1,479,067 (3.40%)

M48-2

43,944,060

21,972,030

95.24%

39,303,373 (89.44%)

37,840,028 (86.11%)

1,463,345 (3.33%)

M72-1

43,969,498

21,984,749

95.12%

39,137,319 (89.01%)

37,646,761 (85.62%)

1,490,558 (3.39%)

M72-2

43,916,848

21,958,424

94.99%

39,174,223 (89.20%)

37,685,789 (85.81%)

1,488,434 (3.39%)

MF6h-1

43,546,706

21,773,353

95.35%

39,103,422 (89.80%)

37,662,283 (86.49%)

1,441,139 (3.31%)

MF6h-2

106,369,018

53,184,509

95.65%

95,679,317 (89.95%)

91,918,225 (86.41%)

3,761,092 (3.54%)

MF12h-1

43,282,586

21,641,293

95.37%

38,468,541 (88.88%)

37,109,332 (85.74%)

1,359,209 (3.14%)

MF12h-2

43,353,906

21,676,953

94.09%

38,229,230 (88.18%)

36,764,922 (84.80%)

1,464,308 (3.38%)

MF24h-1

44,067,724

22,033,862

95.04%

39,013,694 (88.53%)

37,529,355 (85.16%)

1,484,339 (3.37%)

MF24h-2

62,335,764

31,167,882

95.58%

55,555,432 (89.12%)

53,361,504 (85.60%)

2,193,928 (3.52%)

MF48h-1

43,206,022

21,603,011

95.09%

38,531,483 (89.18%)

37,092,612 (85.85%)

1,438,871 (3.33%)

MF48h-2

43,646,946

21,823,473

94.85%

38,808,321 (88.91%)

37,277,147 (85.41%)

1,531,174 (3.51%)

MF72h-1

44,284,052

22,142,026

95.36%

39,277,003 (88.69%)

37,775,990 (85.30%)

1,501,013 (3.39%)

MF72h-2

46,183,586

23,091,793

95.68%

40,890,323 (88.54%)

39,237,494 (84.96%)

1,652,829 (3.58%)

F6-1

43,747,386

21,873,693

95.24%

39,228,875 (89.67%)

37,790,217 (86.38%)

1,438,658 (3.29%)

F6-2

43,134,878

21,567,439

95.03%

38,430,072 (89.09%)

37,019,513 (85.82%)

1,410,559 (3.27%)

F12-1

44,385,304

22,192,652

95.38%

39,996,282 (90.11%)

38,444,180 (86.61%)

1,552,102 (3.50%)

F12-2

44,661,764

22,330,882

95.03%

40,340,410 (90.32%)

38,799,532 (86.87%)

1,540,878 (3.45%)

F24-1

43,189,076

21,594,538

95.22%

38,347,067 (88.79%)

36,877,093 (85.39%)

1,469,974 (3.40%)

F24-2

44,463,082

22,231,541

95.07%

39,394,892 (88.60%)

37,873,134 (85.18%)

1,521,758 (3.42%)

F48-1

43,949,458

21,974,729

95.07%

39,324,956 (89.48%)

37,898,113 (86.23%)

1,426,843 (3.25%)

F48-2

45,317,286

22,658,643

95.22%

40,508,169 (89.39%)

39,072,622 (86.22%)

1,435,547 (3.17%)

F72-1

44,865,026

22,432,513

95.27%

40,082,434 (89.34%)

38,582,263 (86.00%)

1,500,171 (3.34%)

F72-2

39,504,260

19,752,130

95.11%

35,405,840 (89.63%)

34,079,638 (86.27%)

1,326,202 (3.36%)

FM6h-1

42,579,154

21,289,577

94.78%

37,992,466 (89.23%)

36,520,312 (85.77%)

1,472,154 (3.46%)

FM6h-2

45,840,416

22,920,208

95.48%

40,903,164 (89.23%)

39,331,697 (85.80%)

1,571,467 (3.43%)

FM12h-1

44,360,812

22,180,406

95.25%

40,286,783 (90.82%)

38,569,568 (86.95%)

1,717,215 (3.87%)

FM12h-2

44,086,682

22,043,341

95.17%

39,605,117 (89.83%)

38,137,620 (86.51%)

1,467,497 (3.33%)

FM24h-1

43,054,264

21,527,132

94.28%

38,531,698 (89.50%)

37,104,476 (86.18%)

1,427,222 (3.31%)

FM24h-2

43,444,540

21,722,270

94.89%

38,982,536 (89.73%)

37,614,794 (86.58%)

1,367,742 (3.15%)

FM48h-1

43,449,984

21,724,992

95.09%

39,012,802 (89.79%)

37,536,472 (86.39%)

1,476,330 (3.40%)

FM48h-2

43,061,960

21,530,980

94.93%

38,790,499 (90.08%)

37,356,348 (86.75%)

1,434,151 (3.33%)

FM72h-1

48,029,364

24,014,682

95.08%

42,940,136 (89.40%)

41,291,794 (85.97%)

1,648,342 (3.43%)

FM72h-2

41,789,042

20,894,521

94.69%

37,439,400 (89.59%)

36,044,558 (86.25%)

1,394,842 (3.34%)