Table 3 Quantitative measurements per pipeline for the large dataset
Pipeline | Mean gene per cell | Median gene per cell | Mean umi per cell | Median umi per cell | N cells |
|---|---|---|---|---|---|
alevin-fry | 2785.3 | 2923 | 7297.8 | 6991.9 | 15620 |
splitpipe | 2290.6 | 2283 | 6142.6 | 5493 | 15748 |
STARsolo | 2176.1 | 2152 | 5689.2 | 5051 | 15875 |