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  1. In cold and temperate zones, seasonal reproduction plays a crucial role in the survival and reproductive success of species. The photoperiod influences reproductive processes in seasonal breeders through the h...

    Authors: Jianye Chang, Yanglong Xu, Yuting Fu, Jiaxin Liu, Danli Jiang, Jianqiu Pan, Hongjia Ouyang, Wenjun Liu, Jin Xu, Yunbo Tian, Yunmao Huang, Jue Ruan and Xu Shen
    Citation: BMC Genomics 2024 25:197
    Content type: Research Published on:

  2. Lipoxygenase (LOX) is a multifunctional enzyme that is primarily related to plant organ growth and development, biotic and abiotic stress responses, and production of flavor-associated metabolites. In higher p...

    Authors: Lei Xu, Xiaoxi Zhu, Fengyan Yi, Yajiao Liu, Bilig Sod, Mingna Li, Lin Chen, Junmei Kang, Qingchuan Yang and Ruicai Long
    Citation: BMC Genomics 2024 25:195
    Content type: Research Published on:

  3. CRISPR-Cas9 technology has advanced in vivo gene therapy for disorders like hemophilia A, notably through the successful targeted incorporation of the F8 gene into the Alb locus in hepatocytes, effectively cur...

    Authors: Juan-Juan Zhao, Xin-Yu Sun, Sai-Ning Tian, Zong-Ze Zhao, Meng-Di Yin, Mei Zhao, Feng Zhang, Si-Ang Li, Zhi-Xue Yang, Wei Wen, Tao Cheng, An Gong, Jian-Ping Zhang and Xiao-Bing Zhang
    Citation: BMC Genomics 2024 25:189
    Content type: Research Published on:

  4. Haemonchus contortus (H. contortus) is the most common parasitic nematode in ruminants and is prevalent worldwide. H. contortus resistance to albendazole (ABZ) hinders the efficacy of anthelmintic drugs, but litt...

    Authors: Xindi Chen, Tengyu Wang, Wenrui Guo, Xu Yan, Huilin Kou, Yu Yu, Chunxia Liu, Wa Gao, Wenlong Wang and Rui Wang
    Citation: BMC Genomics 2024 25:188
    Content type: Research Published on:

  5. Whole exome sequencing (WES) and whole genome sequencing (WGS) have become standard methods in human clinical diagnostics as well as in population genomics (POPGEN). Blood-derived genomic DNA (gDNA) is routine...

    Authors: Katerina Kvapilova, Pavol Misenko, Jan Radvanszky, Ondrej Brzon, Jaroslav Budis, Juraj Gazdarica, Ondrej Pos, Marie Korabecna, Martin Kasny, Tomas Szemes, Petr Kvapil, Jan Paces and Zbynek Kozmik
    Citation: BMC Genomics 2024 25:187
    Content type: Research Published on:

  6. Venom systems are ideal models to study genetic regulatory mechanisms that underpin evolutionary novelty. Snake venom glands are thought to share a common origin, but there are major distinctions between venom...

    Authors: Cassandra M. Modahl, Summer Xia Han, Jory van Thiel, Candida Vaz, Nathan L. Dunstan, Seth Frietze, Timothy N. W. Jackson, Stephen P. Mackessy and R. Manjunatha Kini
    Citation: BMC Genomics 2024 25:186
    Content type: Research Published on:

  7. Alpaca is a domestic South American camelid probably arising from the domestication of two wild camelids, the vicugna and the guanaco. Two phenotypes are described for alpaca, known as huacaya and suri. Huacay...

    Authors: Stefano Pallotti, Matteo Picciolini, Giovanni Deiana, Dario Pediconi, Marco Antonini, Valerio Napolioni and Carlo Renieri
    Citation: BMC Genomics 2024 25:185
    Content type: Research Published on:

  8. Almost all extant organisms use the same, so-called canonical, genetic code with departures from it being very rare. Even more exceptional are the instances when a eukaryote with non-canonical code can be easi...

    Authors: Fred R. Opperdoes, Kristína Záhonová, Ingrid Škodová-Sveráková, Barbora Bučková, Ľubomíra Chmelová, Julius Lukeš and Vyacheslav Yurchenko
    Citation: BMC Genomics 2024 25:184
    Content type: Research Published on:

  9. Ovarian cancer (OC) has the worst prognosis among gynecological malignancies, most of which are found to be in advanced stage. Cell reduction surgery based on platinum-based chemotherapy is the current standar...

    Authors: Wei Li, Limei Huang, Nana Qi, Qinle Zhang and Zailong Qin
    Citation: BMC Genomics 2024 25:183
    Content type: Research Published on:

  10. Homeodomain-leucine zipper (HD-Zip) transcription factors are plant-specific and play important roles in plant defense against environmental stresses. Identification and functional studies have been carried ou...

    Authors: Yujiao Wang, Hongjuan Wang, Chun Yu, Xiaoming Yan, Jiasong Chu, Benli Jiang and Jiabao Zhu
    Citation: BMC Genomics 2024 25:182
    Content type: Research Published on:

  11. Next-generation Sequencing (NGS) combined with bioinformatic analyses constitutes a powerful approach for identifying and characterizing previously unknown viral genomes. In this study, leaf samples from bitte...

    Authors: Shahrbanou Ghorani, Hossein Massumi, Samin H. Farhangi, Mehdi Mansouri, Jahangir Heydarnejad and Akbar Hosseinipour
    Citation: BMC Genomics 2024 25:181
    Content type: Research Published on:

  12. Pecan scab is a devastating disease that causes damage to pecan (Carya illinoinensis (Wangenh.) K. Koch) fruit and leaves. The disease is caused by the fungus Venturia effusa (G. Winter) and the main management p...

    Authors: Jordan Brungardt, Yanina Alarcon, Jason Shiller, Carolyn Young, Maria J. Monteros, Jennifer J. Randall and Clive H. Bock
    Citation: BMC Genomics 2024 25:180
    Content type: Research Published on:

  13. Gene expression pattern is associated with biological phenotype and is widely used in exploring gene functions. Its evolution is also crucial in understanding species speciation and divergence. The genus Gossy...

    Authors: Yuqing Wu, Rongnan Sun, Tong Huan, Yanyan Zhao, Dongliang Yu and Yuqiang Sun
    Citation: BMC Genomics 2024 25:179
    Content type: Research Published on:

  14. Acute Hepatopancreatic Necrosis Disease (AHPND) causes significant mortality in shrimp aquaculture. The infection is primarily instigated by Vibrio parahaemolyticus (Vp) strains carrying a plasmid encoding the bi...

    Authors: Marieke Vandeputte, Sieglinde Coppens, Peter Bossier, Nick Vereecke and Daisy Vanrompay
    Citation: BMC Genomics 2024 25:178
    Content type: Research Published on:

  15. Prion diseases, also known as transmissible spongiform encephalopathies (TSEs) remain one of the deleterious disorders, which have affected several animal species. Polymorphism of the prion protein (PRNP) gene ma...

    Authors: Adeniyi C. Adeola, Semiu F. Bello, Abdussamad M. Abdussamad, Rahamon A. M. Adedokun, Sunday C. Olaogun, Nasiru Abdullahi, Akanbi I. Mark, Anyebe B. Onoja, Oscar J. Sanke, Godwin F. Mangbon, Jebi Ibrahim, Philip M. Dawuda, Adebowale E. Salako, Samia Kdidi and Mohamed Habib Yahyaoui
    Citation: BMC Genomics 2024 25:177
    Content type: Research Published on:

  16. Xinjiang Mongolian cattle is an indigenous breed that inhabits the Taklimakan Desert and is characterized by its small body size. However, the genomic diversity, origin, and genetic basis underlying the adapta...

    Authors: Lei Xu, Kaiqing Zhou, Xixia Huang, Hong Chen, Hong Dong and Qiuming Chen
    Citation: BMC Genomics 2024 25:176
    Content type: Research Published on:

  17. Brain diseases pose a significant threat to human health, and various network-based methods have been proposed for identifying gene biomarkers associated with these diseases. However, the brain is a complex sy...

    Authors: Ping Zhang, Weihan Zhang, Weicheng Sun, Jinsheng Xu, Hua Hu, Lei Wang and Leon Wong
    Citation: BMC Genomics 2024 25:175
    Content type: Research Published on:

  18. Alfalfa, an essential forage crop known for its high yield, nutritional value, and strong adaptability, has been widely cultivated worldwide. The yield and quality of alfalfa are frequently jeopardized due to ...

    Authors: Jing Yang, Jiangnan Yi, Shihai Ma, Yafang Wang, Jiaxing Song, Shuo Li, Yueyan Feng, Haoyang Sun, Cai Gao, Rongchen Yang, Zhongxing Li, Yuman Cao and Peizhi Yang
    Citation: BMC Genomics 2024 25:174
    Content type: Research Published on:

  19. There is increasing interest in using intestinal organoids to study complex traits like feed efficiency (FE) and host-microbe interactions. The aim of this study was to investigate differences in the molecular...

    Authors: Ole Madsen, Roxann S.C. Rikkers, Jerry M. Wells, Rob Bergsma, Soumya K. Kar, Nico Taverne, Anja J. Taverne-Thiele, Esther D. Ellen and Henri Woelders
    Citation: BMC Genomics 2024 25:173
    Content type: Research Published on:

  21. The highly eusocial stingless bees are crucial pollinators of native and agricultural ecosystems. Nevertheless, genomic studies within this bee tribe remain scarce. We present the genome assembly of the stingl...

    Authors: Natalia de Souza Araujo, Fernando Ogihara, Pedro Mariano Martins and Maria Cristina Arias
    Citation: BMC Genomics 2024 25:171
    Content type: Research Published on:

  23. ATP-binding cassette (ABC) transporter proteins constitute a plant gene superfamily crucial for growth, development, and responses to environmental stresses. Despite their identification in various plants like...

    Authors: Xiaobing Kou, Zhen Zhao, Xinqi Xu, Chang Li, Juyou Wu and Shaoling Zhang
    Citation: BMC Genomics 2024 25:169
    Content type: Research Published on:

  24. Understanding the molecular underpinnings of phenotypic variations is critical for enhancing poultry breeding programs. The Brazilian broiler (TT) and laying hen (CC) lines exhibit striking differences in body...

    Authors: Renata Erbert Contriciani, Carla Vermeulen Carvalho Grade, Igor Buzzatto-Leite, Fernanda Cristina da Veiga, Mônica Corrêa Ledur, Antonio Reverter, Pamela Almeida Alexandre, Aline Silva Mello Cesar, Luiz Lehmann Coutinho and Lúcia Elvira Alvares
    Citation: BMC Genomics 2024 25:168
    Content type: Research Published on:

  25. The most widely practiced strategy for constructing the deep learning (DL) prediction model for drug resistance of Mycobacterium tuberculosis (MTB) involves the adoption of ready-made and state-of-the-art archite...

    Authors: Yu Wang, Zhonghua Jiang, Pengkuan Liang, Zhuochong Liu, Haoyang Cai and Qun Sun
    Citation: BMC Genomics 2024 25:167
    Content type: Research Published on:

  27. Sugarcane (Saccharum spp.) holds exceptional global significance as a vital crop, serving as a primary source of sucrose, bioenergy, and various by-products. The optimization of sugarcane breeding by fine-tuning ...

    Authors: Hongyan Ding, Xiaoxi Feng, Yuan Yuan, Baiyu Wang, Yuhao Wang and Jisen Zhang
    Citation: BMC Genomics 2024 25:165
    Content type: Research Published on:

  28. Guizhou black goat is one of the indigenous black goat breeds in the southwest region of Guizhou, China, which is an ordinary goat for mutton production. They are characterized by moderate body size, black coa...

    Authors: Lingle Chang, Yundi Zheng, Sheng Li, Xi Niu, Shihui Huang, Qingmeng Long, Xueqin Ran and Jiafu Wang
    Citation: BMC Genomics 2024 25:164
    Content type: Research Published on:

  29. Common wheat (Triticum aestivum L.) is a worldwide cereal crop, which is an integral part of the diets of many countries. In addition, the MYB gene of wheat plays a role in the response to salt stress.

    Authors: Yuanhang Mu, Luxi Shi, Huan Tian, Huaizhi Tian, Jv Zhang, Fusheng Zhao, Qingqin Zhang, Suqin Zhang and Guangdong Geng
    Citation: BMC Genomics 2024 25:163
    Content type: Research Published on:

  30. In this work, a novel isatin-Schiff base L2 had been synthesized through a simple reaction between isatin and 2-amino-5-methylthio-1,3,4-thiadiazole. The produced Schiff base L2 was then subjected to a hydroth...

    Authors: Heba E. Saad, Gaber M. Abu El-Reash, Mohamed gaber, Mohamed A. Hashem, Yasmeen G. Abou El-Reash, Nuha Y. Elamin, Mohamed R. Elamin and Yusif S. El-Sayed
    Citation: BMC Genomics 2024 25:162
    Content type: Research Published on:

  32. The Ovar-DRB1 gene, a crucial element of the Major Histocompatibility Complex (MHC) Class II region, initiates adaptive immunity by presenting antigens to T-cells. Genetic diversity in sheep, particularly in MHC ...

    Authors: Bashir Salim, Ryo Nakao, Elisha Chatanga, Olivia Marcuzzi, Muna Ahmed Eissawi, Faisal Almathen, Olivier Hanotte and Guillermo Giovambattista
    Citation: BMC Genomics 2024 25:160
    Content type: Research Published on:

  33. Myoblasts play an important role in muscle growth and repair, but the high glucose environment severely affects their function. The purpose of this study is to explore the potential molecular mechanism of lira...

    Authors: Dongmei Fan, Yunjie Zhang, Lanyu Lu, Fuzai Yin and Bowei Liu
    Citation: BMC Genomics 2024 25:159
    Content type: Research Published on:

  34. Studies have confirmed that Infectious bovine rhinotracheitis virus (IBRV) infection induces mitochondrial damage. MicroRNAs (miRNAs) are a class of noncoding RNA molecules, which are involved in various biolo...

    Authors: Yingcai Ma, Xueping Guo, Qin He, Lu Liu, Zelong Li, Xiaomin Zhao, Wenxi Gu, Qi Zhong, Na Li, Gang Yao and Xuelian Ma
    Citation: BMC Genomics 2024 25:158
    Content type: Research Published on:

  35. Passionfruit (Passiflora edulis) is a significant fruit crop in the commercial sector, owing to its high nutritional and medicinal value. The advent of high-throughput genomics sequencing technology has led to th...

    Authors: Chaowei Yu, Peng Wang, Shengjie Zhang, Jindian Liu, Yingyin Cheng, Songbai Zhang and Zujian Wu
    Citation: BMC Genomics 2024 25:157
    Content type: Database Published on:

  36. Campylobacter spp. is the most frequent cause of bacterial food-borne gastroenteritis and a high priority antibiotic resistant bacterium according to the World Health Organization (WHO). European monitoring of th...

    Authors: Michael Zarske, Huong Quynh Luu, Carlus Deneke, Marie-Theres Knüver, Maja Thieck, Ha Thi Thu Hoang, Nancy Bretschneider, Ngoc Thi Pham, Ingrid Huber and Kerstin Stingl
    Citation: BMC Genomics 2024 25:156
    Content type: Research Published on:

  37. DNA damage repair (DDR) may affect tumorigenesis and therapeutic response in hepatocellular carcinoma (HCC). Long noncoding RNAs (LncRNAs) can regulate DDR and play a vital role in maintaining genomic stabilit...

    Authors: Fei Huang, Chunyan Zhang, Wenjing Yang, Yan Zhou, Yihui Yang, Xinrong Yang, Wei Guo and Beili Wang
    Citation: BMC Genomics 2024 25:155
    Content type: Research Published on:

  38. Significant differences in immune responses, prevalence or susceptibility of diseases and treatment responses have been described between males and females. Despite this, sex-differentiation analysis of the ge...

    Authors: Collins K. Boahen, Hannah Abee, Isis Ricaño Ponce, Leo A. B. Joosten, Mihai G. Netea and Vinod Kumar
    Citation: BMC Genomics 2024 25:154
    Content type: Research Published on:

  40. The accurate prediction of genomic breeding values is central to genomic selection in both plant and animal breeding studies. Genomic prediction involves the use of thousands of molecular markers spanning the ...

    Authors: Vanda M. Lourenço, Joseph O. Ogutu, Rui A.P. Rodrigues, Alexandra Posekany and Hans-Peter Piepho
    Citation: BMC Genomics 2024 25:152
    Content type: Research Published on:

  43. The mediator complex subunits (MED) constitutes a multiprotein complex, with each subunit intricately involved in crucial aspects of plant growth, development, and responses to stress. Nevertheless, scant repo...

    Authors: Le Liang, Dong Wang, Dongmei Xu, Jiachang Xiao, Wen Tang, Xueping Song, Guofeng Yu, Zongxu Liang, Minghui Xie, Zeping Xu, Bo Sun, Yi Tang, Zhi Huang, Yunsong Lai and Huanxiu Li
    Citation: BMC Genomics 2024 25:149
    Content type: Research Published on:

  44. Captivity and artificial food provision are common conservation strategies for the endangered golden snub-nosed monkey (Rhinopithecus roxellana). Anthropogenic activities have been reported to impact the fitness ...

    Authors: Xuanzhen Liu, Jianqiu Yu, Zongjin Huan, Mei Xu, Ting Song, Ruilin Yang, Wei Zhu and Jianping Jiang
    Citation: BMC Genomics 2024 25:148
    Content type: Research Published on:

  45. Diachasmimorpha longicaudata is a hymenopteran fruit fly endoparasitoid. Females of this species find their hosts for oviposition by using complex sensorial mechanisms in response to physical and chemical stimuli...

    Authors: Juan P. Wulff, Lucila M. Traverso, Jose M. Latorre-Estivalis, Diego F. Segura and Silvia B. Lanzavecchia
    Citation: BMC Genomics 2024 25:147
    Content type: Research Published on:

  46. Environmental monitoring of bacterial pathogens is critical for disease control in coastal marine ecosystems to maintain animal welfare and ecosystem function and to prevent significant economic losses. This r...

    Authors: Neža Orel, Eduard Fadeev, Gerhard J. Herndl, Valentina Turk and Tinkara Tinta
    Citation: BMC Genomics 2024 25:146
    Content type: Research Published on:

  47. Schizothorax o’connori is an endemic fish distributed in the upper and lower reaches of the Yarlung Zangbo River in China. It has experienced a fourth round of whole gene replication events and is a good model fo...

    Authors: Kuo Gao, Zhi He, Jinxin Xiong, Qiqi Chen, Bolin Lai, Fei Liu, Ping Chen, Mingqiang Chen, Wenjie Luo, Junjie Huang, Wenxiang Ding, Haochen Wang, Yong Pu, Li Zheng, Yuanyuan Jiao, Mingwang Zhang…
    Citation: BMC Genomics 2024 25:145
    Content type: Research Published on:

  48. The cation/proton antiporter (CPA) superfamily plays a crucial role in regulating ion homeostasis and pH in plant cells, contributing to stress resistance. However, in potato (Solanum tuberosum L.), systematic id...

    Authors: Jintao Liu, Dianjue Li, Jing Wang, Qian Wang, Xiao Guo, Qi Fu, Philip Kear, Guangtao Zhu and Xiaohui Yang
    Citation: BMC Genomics 2024 25:144
    Content type: Research Published on:

  49. Whole-exome sequencing (WES) is widely used to diagnose complex genetic diseases and rare conditions. The implementation of a robust and effective quality control system for sample identification and tracking ...

    Authors: Yong Huang, Yuanyuan Xiao, Shengqiu Qu, Jiaming Xue, Lin Zhang, Li Wang and Weibo Liang
    Citation: BMC Genomics 2024 25:142
    Content type: Research Published on:

  50. Schizochytrium limacinum holds significant value utilized in the industrial-scale synthesis of natural DHA. Nitrogen-limited treatment can effectively increase the content of fatty acids and DHA, but there is cur...

    Authors: Duo Chen, Jing Chen, Rongchun Dai, Xuehai Zheng, Yuying Han, Youqiang Chen and Ting Xue
    Citation: BMC Genomics 2024 25:141
    Content type: Research Published on:

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BMC Genomics

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